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    <loc>https://proto.evodesign.org/docs/language/constraints/structure-radius-gyration</loc>
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    <loc>https://proto.evodesign.org/docs/language/constraints/targetscan-site</loc>
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    <loc>https://proto.evodesign.org/docs/language/constraints/uracil-content</loc>
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    <loc>https://proto.evodesign.org/docs/language/generators/autoregressive/overview</loc>
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    <loc>https://proto.evodesign.org/docs/language/generators/evo1</loc>
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    <loc>https://proto.evodesign.org/docs/language/generators/evo2</loc>
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    <loc>https://proto.evodesign.org/docs/language/generators/fampnn</loc>
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    <loc>https://proto.evodesign.org/docs/language/generators/freebindcraft</loc>
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    <loc>https://proto.evodesign.org/docs/language/generators/gradient/overview</loc>
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    <loc>https://proto.evodesign.org/docs/language/generators/inverse_folding/overview</loc>
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    <loc>https://proto.evodesign.org/docs/language/generators/ligandmpnn</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/generators/mpnn-mutation</loc>
    <lastmod>2026-10-24T06:06:42.300Z</lastmod>
  </url>

  <url>
    <loc>https://proto.evodesign.org/docs/language/generators/msa</loc>
    <lastmod>2026-10-24T06:06:42.279Z</lastmod>
  </url>

  <url>
    <loc>https://proto.evodesign.org/docs/language/generators/mutation/overview</loc>
    <lastmod>2026-10-24T05:25:37.160Z</lastmod>
  </url>

  <url>
    <loc>https://proto.evodesign.org/docs/language/generators/position-weight</loc>
    <lastmod>2026-10-24T06:06:42.299Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/generators/progen2</loc>
    <lastmod>2026-10-24T06:06:42.301Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/generators/proteinmpnn</loc>
    <lastmod>2026-10-24T06:06:42.302Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/generators/random-nucleotide</loc>
    <lastmod>2026-10-24T06:06:42.291Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/generators/random-protein</loc>
    <lastmod>2026-10-24T06:06:42.293Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/generators/rfdiffusion-mpnn-binder</loc>
    <lastmod>2026-10-24T06:06:42.289Z</lastmod>
  </url>

  <url>
    <loc>https://proto.evodesign.org/docs/language/generators/semigreedy-mutation</loc>
    <lastmod>2026-10-24T06:06:42.296Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/guides/examples/binder-design</loc>
    <lastmod>2026-06-19T20:09:32.620Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/guides/examples/cas9-rejection-sampling</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/guides/examples/dna-optimization</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/guides/examples/epigenomic-morse</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/guides/examples/germinal-pdl1</loc>
    <lastmod>2026-06-19T20:09:32.622Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/guides/examples/gradient-protein-hallucination</loc>
    <lastmod>2026-06-19T20:09:32.640Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/guides/examples/intron-design</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/guides/examples/intron-design-alphagenome</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/guides/examples/k562-specificity</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/guides/examples/multi-stage-optimization</loc>
    <lastmod>2026-06-19T20:09:33.645Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/guides/examples/protein-hunter</loc>
    <lastmod>2026-06-19T20:09:33.648Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/guides/examples/proteinmpnn-ensemble</loc>
    <lastmod>2026-06-19T20:09:33.648Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/guides/examples/symmetric-proteins</loc>
    <lastmod>2026-06-19T20:09:33.646Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/guides/using-constraints</loc>
    <lastmod>2026-08-11T22:08:19.238Z</lastmod>
  </url>

  <url>
    <loc>https://proto.evodesign.org/docs/language/guides/using-generators</loc>
    <lastmod>2026-06-19T20:09:33.647Z</lastmod>
  </url>

  <url>
    <loc>https://proto.evodesign.org/docs/language/guides/using-optimizers</loc>
    <lastmod>2026-06-19T20:09:33.646Z</lastmod>
  </url>

  <url>
    <loc>https://proto.evodesign.org/docs/language/installation</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/introduction</loc>
    <lastmod>2026-10-24T05:25:35.319Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/optimizers/beam-search</loc>
    <lastmod>2026-10-24T06:06:42.301Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/optimizers/cycling</loc>
    <lastmod>2026-10-24T06:06:42.298Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/optimizers/genetic-algorithm</loc>
    <lastmod>2026-10-24T06:06:42.285Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/optimizers/gradient</loc>
    <lastmod>2026-10-24T06:06:42.300Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/optimizers/mcmc</loc>
    <lastmod>2026-10-24T06:06:42.290Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/optimizers/rejection-sampling</loc>
    <lastmod>2026-10-24T06:06:42.307Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/language/quickstart</loc>
    <lastmod>2026-07-26T23:33:03.967Z</lastmod>
  </url>

  <url>
    <loc>https://proto.evodesign.org/docs/mcp/functions</loc>
    <lastmod>2026-10-06T04:34:30.382Z</lastmod>
  </url>

  <url>
    <loc>https://proto.evodesign.org/docs/mcp/installation</loc>
    <lastmod>2026-10-23T23:47:44.685Z</lastmod>
  </url>

  <url>
    <loc>https://proto.evodesign.org/docs/mcp/introduction</loc>
    <lastmod>2026-09-06T19:59:26.252Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/binder-design/bindcraft</loc>
    <lastmod>2026-10-24T06:06:42.286Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/binder-design/freebindcraft</loc>
    <lastmod>2026-10-24T21:24:49.219Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/binder-design/germinal</loc>
    <lastmod>2026-10-24T21:24:49.212Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/binder-design/overview</loc>
    <lastmod>2026-07-26T23:33:03.969Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/causal-models/evo1</loc>
    <lastmod>2026-10-24T21:24:49.220Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/causal-models/evo2</loc>
    <lastmod>2026-10-24T21:24:49.226Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/causal-models/overview</loc>
    <lastmod>2026-07-26T23:33:03.975Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/causal-models/progen2</loc>
    <lastmod>2026-10-24T21:24:49.225Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/causal-models/progen3</loc>
    <lastmod>2026-10-24T21:24:49.218Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/concepts/entities</loc>
    <lastmod>2026-08-05T17:37:14.910Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/concepts/overview</loc>
    <lastmod>2026-08-05T17:37:14.908Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/database-retrieval/alphafold-db</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/database-retrieval/alphamissense-db</loc>
    <lastmod>2026-10-24T21:24:49.216Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/database-retrieval/ccd-lookup</loc>
    <lastmod>2026-10-24T21:24:49.213Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/database-retrieval/ensembl</loc>
    <lastmod>2026-10-24T21:24:49.225Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/database-retrieval/interproscan</loc>
    <lastmod>2026-10-24T21:24:49.221Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/database-retrieval/ncbi</loc>
    <lastmod>2026-10-24T21:24:49.222Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/database-retrieval/overview</loc>
    <lastmod>2026-10-06T04:12:21.528Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/database-retrieval/pdb</loc>
    <lastmod>2026-10-24T21:24:49.219Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/database-retrieval/pubchem</loc>
    <lastmod>2026-10-24T21:24:49.212Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/database-retrieval/rfam</loc>
    <lastmod>2026-10-24T21:24:49.215Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/database-retrieval/sequence-fetch</loc>
    <lastmod>2026-10-24T21:24:49.213Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/database-retrieval/uniprot</loc>
    <lastmod>2026-10-24T21:24:49.217Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/epitope-prediction/netmhcpan</loc>
    <lastmod>2026-10-24T06:06:42.280Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/epitope-prediction/overview</loc>
    <lastmod>2026-10-24T05:25:32.371Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/gene-annotation/crispr-tracr-rna</loc>
    <lastmod>2026-10-24T21:24:49.222Z</lastmod>
  </url>

  <url>
    <loc>https://proto.evodesign.org/docs/tools/gene-annotation/meme</loc>
    <lastmod>2026-10-24T06:06:42.306Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/gene-annotation/minced</loc>
    <lastmod>2026-10-24T21:24:49.216Z</lastmod>
  </url>

  <url>
    <loc>https://proto.evodesign.org/docs/tools/gene-annotation/miranda</loc>
    <lastmod>2026-10-24T21:24:49.227Z</lastmod>
  </url>

  <url>
    <loc>https://proto.evodesign.org/docs/tools/gene-annotation/overview</loc>
    <lastmod>2026-08-12T01:52:00.642Z</lastmod>
  </url>

  <url>
    <loc>https://proto.evodesign.org/docs/tools/gene-annotation/promoter-calculator</loc>
    <lastmod>2026-10-24T21:24:49.221Z</lastmod>
  </url>

  <url>
    <loc>https://proto.evodesign.org/docs/tools/gene-annotation/pyhmmer</loc>
    <lastmod>2026-10-24T21:24:49.245Z</lastmod>
  </url>

  <url>
    <loc>https://proto.evodesign.org/docs/tools/guides/cloud-inference</loc>
    <lastmod>2026-08-05T17:37:14.911Z</lastmod>
  </url>

  <url>
    <loc>https://proto.evodesign.org/docs/tools/guides/device-management</loc>
    <lastmod>2026-06-19T20:09:33.649Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/guides/parallel-execution</loc>
    <lastmod>2026-08-12T01:52:00.635Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/guides/quickstart</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/guides/storage</loc>
    <lastmod>2026-10-06T04:12:21.489Z</lastmod>
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    <loc>https://proto.evodesign.org/docs/tools/guides/testing</loc>
    <lastmod>2026-06-20T00:30:00.977Z</lastmod>
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    <loc>https://proto.evodesign.org/docs/tools/guides/tool-environments</loc>
    <lastmod>2026-08-12T01:52:00.651Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/guides/tool-persistence</loc>
    <lastmod>2026-08-12T01:52:00.632Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/installation</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/introduction</loc>
    <lastmod>2026-10-24T05:25:32.621Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/inverse-folding/caliby</loc>
    <lastmod>2026-10-24T21:24:49.220Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/inverse-folding/esm-if1</loc>
    <lastmod>2026-10-24T21:24:49.214Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/inverse-folding/fampnn</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/inverse-folding/ligandmpnn</loc>
    <lastmod>2026-10-24T21:24:49.211Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/inverse-folding/overview</loc>
    <lastmod>2026-10-24T05:25:32.360Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/inverse-folding/proteinmpnn</loc>
    <lastmod>2026-10-24T21:24:49.226Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/masked-models/ablang</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/masked-models/codonfm</loc>
    <lastmod>2026-10-24T21:24:45.210Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/masked-models/esm2</loc>
    <lastmod>2026-10-24T21:24:45.205Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/masked-models/esm3</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/masked-models/esmc</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/masked-models/glm2</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/masked-models/minerva</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/masked-models/overview</loc>
    <lastmod>2026-10-06T04:12:21.503Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/modal-integration</loc>
    <lastmod>2026-09-06T15:30:41.533Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/molecular-docking/overview</loc>
    <lastmod>2026-08-11T18:06:14.278Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/molecular-docking/vina</loc>
    <lastmod>2026-10-24T06:06:38.303Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/mutagenesis/overview</loc>
    <lastmod>2026-07-26T23:33:01.174Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/mutagenesis/random-nucleotide</loc>
    <lastmod>2026-10-24T21:24:45.207Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/mutagenesis/random-protein</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/orf-prediction/orfipy</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/orf-prediction/overview</loc>
    <lastmod>2026-06-08T00:34:55.733Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/orf-prediction/prodigal</loc>
    <lastmod>2026-10-24T21:24:45.208Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/organizations/arc-institute</loc>
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    <loc>https://proto.evodesign.org/docs/tools/organizations/aureka-ai-research</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/organizations/autosome-org</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/organizations/biohub</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/organizations/boltz</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/organizations/broad-institute</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/organizations/bytedance</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/organizations/calico</loc>
    <lastmod>2026-10-24T05:25:32.362Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/organizations/chai-discovery</loc>
    <lastmod>2026-10-24T05:25:32.366Z</lastmod>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/organizations/columbia-university</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/organizations/dtu-health-tech-section-of-bioinformatics</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/organizations/dunbrack-lab</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/organizations/embl-ebi</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/organizations/forli-lab</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/organizations/genomic-intelligence</loc>
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  <url>
    <loc>https://proto.evodesign.org/docs/tools/organizations/google-deepmind</loc>
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