> ## Documentation Index > Fetch the complete documentation index at: https://proto.evodesign.org/docs/llms.txt > Use this file to discover all available pages before exploring further. # Structure Dynamics > Sample protein conformational ensembles Generate conformational ensembles that capture the range of structures a protein adopts at equilibrium. Rather than returning a single static model, these tools sample many plausible conformations, approximating the diversity that explicit molecular-dynamics simulation would reveal at far greater cost. * **Input:** a protein sequence. * **Output:** an ensemble of sampled conformations approximating the protein's equilibrium structural diversity.