> ## Documentation Index > Fetch the complete documentation index at: https://proto.evodesign.org/docs/llms.txt > Use this file to discover all available pages before exploring further. # Structure Prediction > Predict 3D protein and RNA structures from sequences Predict three-dimensional molecular structure from sequence. These tools range from fast single-sequence folding to co-folding models that handle protein complexes, nucleic acids, and ligands, and most report confidence scores that indicate how reliable each part of a prediction is. * **Input:** one or more sequences, optionally assembled into a multi-chain complex with nucleic acids or ligands. * **Output:** a predicted 3D structure for each input, annotated with per-residue and per-interface confidence scores.

Google DeepMind

Rutgers University

Columbia University